Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF550 ENSBTAG00000009460

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Description

zinc finger protein 550 [Source:UniProtKB Gene Name;Acc:A0AAA9TNT5]

Location

Primary_assembly 18: 64,753,095-64,792,463 reverse strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 5 transcripts (splice variants), 138 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000092862.2	ZNF550-201	3049	535aa	ENSBTAP00000089786.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SWU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000128616.2	ZNF550-203	2770	424aa	ENSBTAP00000080490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQU3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000131983.1	ZNF550-202	2431	472aa	ENSBTAP00000098005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TNT5	-
ENSBTAT00000092724.1	ZNF550-204	2255	402aa	ENSBTAP00000075412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSB7	-
ENSBTAT00000012446.6	ZNF550-205	1960	424aa	ENSBTAP00000052177.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQU3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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