Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ICA1L ENSBTAG00000008673

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Description

islet cell autoantigen 1 like [Source:VGNC Symbol;Acc:VGNC:30024]

Location

Primary_assembly 2: 91,142,445-91,198,532 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 4 transcripts (splice variants), 187 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000098558.1	ICA1L-201	2676	491aa	ENSBTAP00000078281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000085058.2	ICA1L-202	2598	465aa	ENSBTAP00000071212.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MNQ4	-
ENSBTAT00000011435.7	ICA1L-203	1744	466aa	ENSBTAP00000011435.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BF83	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000129425.1	ICA1L-204	368	77aa	ENSBTAP00000098294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TMT0	-

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Summary

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