Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRICKLE1 ENSBTAG00000008596

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Description

prickle planar cell polarity protein 1 [Source:VGNC Symbol;Acc:VGNC:33315]

Location

Primary_assembly 5: 38,149,219-38,171,657 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 4 transcripts (splice variants), 259 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000100579.1	PRICKLE1-202	4333	900aa	ENSBTAP00000090482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T1N0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000072372.2	PRICKLE1-203	4264	877aa	ENSBTAP00000061102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMK1	-
ENSBTAT00000084935.2	PRICKLE1-201	4204	857aa	ENSBTAP00000056710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LF59	-
ENSBTAT00000011340.7	PRICKLE1-204	3986	834aa	ENSBTAP00000011340.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DLQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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