Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNPO1 ENSBTAG00000007979

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Description

transportin 1 [Source:VGNC Symbol;Acc:VGNC:36199]

Location

Primary_assembly 20: 8,728,232-8,816,683 reverse strand.

ARS-UCD1.3:CM008187.2

About this gene

This gene has 8 transcripts (splice variants), 222 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000010491.7	TNPO1-204	3055	898aa	ENSBTAP00000010491.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SYU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000100152.1	TNPO1-201	3236	880aa	ENSBTAP00000079029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000092415.1	TNPO1-202	3086	878aa	ENSBTAP00000099708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000076134.2	TNPO1-205	2959	858aa	ENSBTAP00000073075.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MP13	-
ENSBTAT00000079879.2	TNPO1-203	2940	888aa	ENSBTAP00000068082.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGE6	-
ENSBTAT00000113538.1	TNPO1-206	2905	848aa	ENSBTAP00000078876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000079623.2	TNPO1-207	2698	870aa	ENSBTAP00000058013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMQ9	-
ENSBTAT00000134285.1	TNPO1-208	2523	775aa	ENSBTAP00000099259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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