Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC38A11 ENSBTAG00000007650

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Description

solute carrier family 38 member 11 [Source:VGNC Symbol;Acc:VGNC:34848]

Location

Primary_assembly 2: 31,290,418-31,348,547 forward strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000068522.2	SLC38A11-204	1620	485aa	ENSBTAP00000065345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N5C4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000010065.5	SLC38A11-201	1629	463aa	ENSBTAP00000010065.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MMH7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000097237.1	SLC38A11-205	1622	463aa	ENSBTAP00000101447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000135040.1	SLC38A11-202	1563	441aa	ENSBTAP00000092617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000114945.1	SLC38A11-203	1554	438aa	ENSBTAP00000092132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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