Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMARCA2 ENSBTAG00000007494

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:VGNC Symbol;Acc:VGNC:34986]

Location

Primary_assembly 8: 42,369,826-42,548,746 reverse strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 7 transcripts (splice variants), 210 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000129542.2	SMARCA2-207	5757	1572aa	ENSBTAP00000086916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LRS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000083498.3	SMARCA2-205	5680	1572aa	ENSBTAP00000057766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LRS4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000035681.6	SMARCA2-206	5626	1554aa	ENSBTAP00000035551.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKK5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000117722.2	SMARCA2-204	2872	636aa	ENSBTAP00000089144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SYH4	-
ENSBTAT00000120750.2	SMARCA2-203	1869	276aa	ENSBTAP00000075808.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RUH8	-
ENSBTAT00000086834.2	SMARCA2-202	1676	278aa	ENSBTAP00000073683.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NM90	-
ENSBTAT00000132262.1	SMARCA2-201	1622	260aa	ENSBTAP00000093856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TB19	-

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Summary

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