Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: C20H5orf34 ENSBTAG00000007461

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Description

chromosome 20 C5orf34 homolog [Source:VGNC Symbol;Acc:VGNC:52671]

Location

Primary_assembly 20: 31,304,062-31,335,480 forward strand.

ARS-UCD1.3:CM008187.2

About this gene

This gene has 4 transcripts (splice variants) and 175 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009815.5	C20H5orf34-203	2153	638aa	ENSBTAP00000009815.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4FUB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000098802.1	C20H5orf34-201	2243	608aa	ENSBTAP00000081179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000082919.2	C20H5orf34-204	2056	637aa	ENSBTAP00000058741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MV26	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000070891.2	C20H5orf34-202	1833	577aa	ENSBTAP00000064024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M213	-

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Summary

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