Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCAMP1 ENSBTAG00000007371

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Description

secretory carrier membrane protein 1 [Source:VGNC Symbol;Acc:VGNC:34315]

Location

Primary_assembly 10: 9,402,194-9,554,737 forward strand.

ARS-UCD1.3:CM008177.2

About this gene

This gene has 4 transcripts (splice variants), 258 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009693.6	SCAMP1-204	1283	354aa	ENSBTAP00000009693.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3T0D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000093430.1	SCAMP1-201	2226	341aa	ENSBTAP00000097266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000090528.1	SCAMP1-202	2139	312aa	ENSBTAP00000096146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000079210.2	SCAMP1-203	1080	323aa	ENSBTAP00000065773.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYD5	-

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Summary

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