Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LMO2 ENSBTAG00000006951

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Description

LIM domain only 2 [Source:VGNC Symbol;Acc:VGNC:30934]

Location

Primary_assembly 15: 64,472,395-64,485,313 reverse strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009126.6	LMO2-204	2006	340aa	ENSBTAP00000009126.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DI60	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000123488.1	LMO2-202	1772	262aa	ENSBTAP00000102780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TWP8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000087859.1	LMO2-203	1758	224aa	ENSBTAP00000086885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SUP9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000152472.1	LMO2-201	1242	148aa	ENSBTAP00000104396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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