Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: C8H9orf85 ENSBTAG00000006831

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Description

chromosome 8 C9orf85 homolog [Source:NCBI gene (formerly Entrezgene);Acc:614778]

Location

Primary_assembly 8: 48,157,920-48,230,576 forward strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 4 transcripts (splice variants), 213 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000087469.2	C8H9orf85-201	1548	166aa	ENSBTAP00000061346.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000105578.1	C8H9orf85-202	1476	142aa	ENSBTAP00000094532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000008975.5	C8H9orf85-203	1074	141aa	ENSBTAP00000008975.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R7R1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000108466.1	C8H9orf85-204	692	149aa	ENSBTAP00000094952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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