Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SOD2 ENSBTAG00000006523

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Description

superoxide dismutase 2 [Source:NCBI gene (formerly Entrezgene);Acc:281496]

Gene Synonyms

MnSOD, SOD2X1, SOD2X2

Location

Primary_assembly 9: 95,954,731-95,966,326 reverse strand.

ARS-UCD2.0:CM008176.2

About this gene

This gene has 5 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000008569.7	SOD2-203	2327	492aa	ENSBTAP00000008569.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BHL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000128895.1	SOD2-204	2204	451aa	ENSBTAP00000103312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U1X3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000122495.1	SOD2-202	1269	183aa	ENSBTAP00000103957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U061	-
ENSBTAT00000102188.1	SOD2-201	1036	286aa	ENSBTAP00000083723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SIV8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000103866.1	SOD2-205	557	162aa	ENSBTAP00000098010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TNU0	-

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Summary

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