Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: XBP1 ENSBTAG00000005970

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Description

X-box binding protein 1 [Source:VGNC Symbol;Acc:VGNC:53930]

Location

Primary_assembly 17: 68,052,009-68,057,008 reverse strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 3 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000007835.6	XBP1-201	1770	379aa	ENSBTAP00000007835.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DI37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000114652.1	XBP1-203	1718	238aa	ENSBTAP00000102912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U020	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000147940.1	XBP1-202	1641	336aa	ENSBTAP00000104832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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