Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLIT2 ENSBTAG00000005108

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Description

slit guidance ligand 2 [Source:VGNC Symbol;Acc:VGNC:34960]

Location

Primary_assembly 6: 39,779,696-40,184,421 forward strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 3 transcripts (splice variants), 194 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133943.1	SLIT2-201	6362	1543aa	ENSBTAP00000101061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TWU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000061059.4	SLIT2-202	6323	1530aa	ENSBTAP00000053607.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MLJ7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000129386.1	SLIT2-203	6311	1526aa	ENSBTAP00000102452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TY67	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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