Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRRX1 ENSBTAG00000004570

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Description

paired related homeobox 1 [Source:VGNC Symbol;Acc:VGNC:33412]

Location

Primary_assembly 16: 38,201,016-38,275,343 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 3 transcripts (splice variants), 217 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006003.6	PRRX1-202	983	245aa	ENSBTAP00000006003.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VE85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132562.1	PRRX1-201	1847	200aa	ENSBTAP00000080760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SED8	-
ENSBTAT00000078802.3	PRRX1-203	1162	217aa	ENSBTAP00000059209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMJ0	-

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Summary

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