Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX6 ENSBTAG00000004561

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Description

paired box 6 [Source:VGNC Symbol;Acc:VGNC:32598]

Location

Primary_assembly 15: 62,559,117-62,588,024 reverse strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 5 transcripts (splice variants), 228 orthologues and 52 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000105105.1	PAX6-204	2572	441aa	ENSBTAP00000085345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000080697.2	PAX6-202	2730	436aa	ENSBTAP00000063429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M0D8	-
ENSBTAT00000005994.5	PAX6-203	2688	422aa	ENSBTAP00000005994.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZF1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000093533.1	PAX6-201	2264	420aa	ENSBTAP00000091433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000096275.1	PAX6-205	2126	374aa	ENSBTAP00000080718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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