Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ST3GAL6 ENSBTAG00000004471

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Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:VGNC Symbol;Acc:VGNC:35335]

Location

Primary_assembly 1: 43,023,979-43,110,723 forward strand.

ARS-UCD2.0:CM008168.2

About this gene

This gene has 3 transcripts (splice variants), 122 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000005868.5	ST3GAL6-202	3072	331aa	ENSBTAP00000005868.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6H8M7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000082869.3	ST3GAL6-203	3048	323aa	ENSBTAP00000059361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVL5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000069771.3	ST3GAL6-201	2613	299aa	ENSBTAP00000059813.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZZ52	-

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Summary

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