Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TMEM45A ENSBTAG00000004459

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Description

transmembrane protein 45A [Source:NCBI gene (formerly Entrezgene);Acc:509461]

Location

Primary_assembly 1: 44,948,291-45,061,337 forward strand.

ARS-UCD1.3:CM008168.2

About this gene

This gene has 5 transcripts (splice variants), 211 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000074340.2	TMEM45A-201	1212	294aa	ENSBTAP00000061201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000103610.1	TMEM45A-205	1625	288aa	ENSBTAP00000085284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000005845.5	TMEM45A-202	1462	275aa	ENSBTAP00000005845.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAV7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000085573.2	TMEM45A-204	1398	291aa	ENSBTAP00000057333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLC6	-
ENSBTAT00000100253.1	TMEM45A-203	1264	278aa	ENSBTAP00000077477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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