Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RUNX2 ENSBTAG00000004104

.

Description

RUNX family transcription factor 2 [Source:VGNC Symbol;Acc:VGNC:34220]

Location

Primary_assembly 23: 18,593,753-18,944,861 forward strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 5 transcripts (splice variants), 147 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000097127.1	RUNX2-202	1791	527aa	ENSBTAP00000089485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000075519.3	RUNX2-205	2752	482aa	ENSBTAP00000061220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZS1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000066565.2	RUNX2-203	2584	496aa	ENSBTAP00000072258.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000068695.3	RUNX2-204	2139	504aa	ENSBTAP00000060333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXS0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000105990.2	RUNX2-201	2086	518aa	ENSBTAP00000093828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T4W5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.