Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBP1 ENSBTAG00000003968

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Description

upstream binding protein 1 [Source:VGNC Symbol;Acc:VGNC:49155]

Location

Primary_assembly 22: 7,648,953-7,712,993 reverse strand.

ARS-UCD1.3:CM008189.2

About this gene

This gene has 2 transcripts (splice variants), 213 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000005181.7	UBP1-202	2398	536aa	ENSBTAP00000005181.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BG95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000101318.1	UBP1-201	2967	500aa	ENSBTAP00000080063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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