Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TTC39B ENSBTAG00000003943

.

Description

tetratricopeptide repeat domain 39B [Source:VGNC Symbol;Acc:VGNC:36476]

Location

Primary_assembly 8: 28,971,495-29,121,098 forward strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 6 transcripts (splice variants), 257 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000067019.2	TTC39B-204	3033	643aa	ENSBTAP00000065128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M9K0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000124185.1	TTC39B-201	3187	618aa	ENSBTAP00000076830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000120324.1	TTC39B-202	2974	547aa	ENSBTAP00000100848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000032429.5	TTC39B-205	2833	591aa	ENSBTAP00000032361.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MTS9	-
ENSBTAT00000092692.1	TTC39B-206	2768	576aa	ENSBTAP00000084066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000111418.1	TTC39B-203	1361	188aa	ENSBTAP00000075562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.