Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MBD1 ENSBTAG00000003801

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Description

methyl-CpG binding domain protein 1 [Source:VGNC Symbol;Acc:VGNC:31273]

Location

Primary_assembly 24: 49,855,041-49,914,540 reverse strand.

ARS-UCD2.0:CM008191.2

About this gene

This gene has 10 transcripts (splice variants), 177 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000103921.1	MBD1-203	5321	1171aa	ENSBTAP00000083154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SCN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000116053.1	MBD1-202	5246	1146aa	ENSBTAP00000074777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RRJ5	-
ENSBTAT00000003444.7	MBD1-201	3879	632aa	ENSBTAP00000003444.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YJU5	-
ENSBTAT00000080810.3	MBD1-204	3516	1136aa	ENSBTAP00000071943.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NIQ9	-
ENSBTAT00000086116.2	MBD1-208	3071	681aa	ENSBTAP00000074393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRI0	-
ENSBTAT00000079863.2	MBD1-209	2921	631aa	ENSBTAP00000060840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUL8	-
ENSBTAT00000080029.2	MBD1-210	2807	593aa	ENSBTAP00000058993.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LIQ1	-
ENSBTAT00000125562.1	MBD1-207	2789	587aa	ENSBTAP00000083596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SIL1	-
ENSBTAT00000004954.5	MBD1-205	2789	843aa	ENSBTAP00000004954.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QVZ7	-
ENSBTAT00000080481.2	MBD1-206	2596	632aa	ENSBTAP00000059543.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MW55	-

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Summary

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