Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC24D ENSBTAG00000003619

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Description

SEC24 homolog D, COPII coat complex component [Source:VGNC Symbol;Acc:VGNC:34416]

Location

Primary_assembly 6: 6,455,390-6,606,452 forward strand.

ARS-UCD1.3:CM008173.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000097027.1	SEC24D-204	3707	1045aa	ENSBTAP00000102869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000004721.7	SEC24D-203	4533	1033aa	ENSBTAP00000004721.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MV07	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000118773.1	SEC24D-202	4338	1032aa	ENSBTAP00000085194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000107413.1	SEC24D-201	2752	838aa	ENSBTAP00000087894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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