Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RBPJ ENSBTAG00000003602

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Description

recombination signal binding protein for immunoglobulin kappa J region [Source:VGNC Symbol;Acc:VGNC:53775]

Location

Primary_assembly 6: 45,645,845-45,887,976 forward strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 10 transcripts (splice variants), 283 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000120068.2	RBPJ-202	5840	504aa	ENSBTAP00000086585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SR92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000103786.2	RBPJ-203	5744	501aa	ENSBTAP00000091287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3R6	-
ENSBTAT00000093549.2	RBPJ-208	5716	469aa	ENSBTAP00000083032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SH60	-
ENSBTAT00000004696.7	RBPJ-201	5696	491aa	ENSBTAP00000004696.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YL50	-
ENSBTAT00000113010.2	RBPJ-210	5612	445aa	ENSBTAP00000080185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4S5	-
ENSBTAT00000096751.2	RBPJ-207	5564	487aa	ENSBTAP00000078827.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6A6 Q3SZ41	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000089933.2	RBPJ-209	5521	481aa	ENSBTAP00000092320.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T8V7	-
ENSBTAT00000119286.2	RBPJ-206	2054	465aa	ENSBTAP00000077810.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S6M7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000122765.2	RBPJ-205	1921	486aa	ENSBTAP00000092654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T1J5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000126659.2	RBPJ-204	1783	440aa	ENSBTAP00000083685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SLU2	-

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Summary

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