Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LHX5 ENSBTAG00000003107

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Description

LIM homeobox 5 [Source:VGNC Symbol;Acc:VGNC:30875]

Location

Primary_assembly 17: 60,981,908-60,991,110 forward strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 2 transcripts (splice variants), 127 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000004042.5	LHX5-201	2165	443aa	ENSBTAP00000004042.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Q963	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000104422.1	LHX5-202	1996	436aa	ENSBTAP00000081967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SEF1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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