Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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  - Gene tree
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ID History
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Gene: PRPF39 ENSBTAG00000002603

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Description

pre-mRNA processing factor 39 [Source:VGNC Symbol;Acc:VGNC:33377]

Location

Primary_assembly 21: 54,809,719-54,844,780 forward strand.

ARS-UCD1.3:CM008188.2

About this gene

This gene has 2 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000003373.6	PRPF39-201	2911	667aa	ENSBTAP00000003373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E4M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000076978.2	PRPF39-202	2690	548aa	ENSBTAP00000057171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRZ3	-

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Summary

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