Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TCF12 ENSBTAG00000002586

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Description

transcription factor 12 [Source:VGNC Symbol;Acc:VGNC:35686]

Location

Primary_assembly 10: 53,023,357-53,416,681 reverse strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 5 transcripts (splice variants), 305 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000035927.7	TCF12-204	4751	706aa	ENSBTAP00000035793.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MV33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000115645.2	TCF12-205	4679	682aa	ENSBTAP00000097338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TFJ5 A0JN84	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000127917.2	TCF12-203	4509	624aa	ENSBTAP00000099163.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TPG6	-
ENSBTAT00000108779.2	TCF12-201	4087	536aa	ENSBTAP00000082388.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFK4	-
ENSBTAT00000104956.2	TCF12-202	3875	446aa	ENSBTAP00000082401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S8N1	-

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Summary

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