Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMPD4 ENSBTAG00000002130

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Description

sphingomyelin phosphodiesterase 4 [Source:VGNC Symbol;Acc:VGNC:35032]

Location

Primary_assembly 17: 72,403,531-72,419,364 forward strand.

ARS-UCD1.3:CM008184.2

About this gene

This gene has 3 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000029373.6	SMPD4-201	3627	867aa	ENSBTAP00000029373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000073786.2	SMPD4-202	3540	838aa	ENSBTAP00000059802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWJ3	-
ENSBTAT00000110195.1	SMPD4-203	3468	814aa	ENSBTAP00000100854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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