Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LIN7C ENSBTAG00000001460

.

Description

lin-7 homolog C, crumbs cell polarity complex component [Source:VGNC Symbol;Acc:VGNC:30897]

Location

Primary_assembly 15: 58,200,265-58,248,220 reverse strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 6 transcripts (splice variants), 212 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000126814.1	LIN7C-205	3816	215aa	ENSBTAP00000100419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TPV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000001914.6	LIN7C-204	3827	211aa	ENSBTAP00000001914.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DHU4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000106901.1	LIN7C-203	3795	211aa	ENSBTAP00000095407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TGS1	-
ENSBTAT00000128202.1	LIN7C-202	1624	196aa	ENSBTAP00000079380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S7U9	-
ENSBTAT00000129244.1	LIN7C-201	672	200aa	ENSBTAP00000090156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T192	-
ENSBTAT00000087965.1	LIN7C-206	606	201aa	ENSBTAP00000088858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZQ2	-

.

Summary

.

.