Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TFAP2A ENSBTAG00000001250

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Description

transcription factor AP-2 alpha [Source:VGNC Symbol;Acc:VGNC:35776]

Location

Primary_assembly 23: 45,615,057-45,637,787 forward strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 7 transcripts (splice variants), 199 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000094140.1	TFAP2A-204	3056	483aa	ENSBTAP00000079113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5H5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000066445.3	TFAP2A-205	3546	431aa	ENSBTAP00000067130.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1E1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000074584.3	TFAP2A-206	3407	452aa	ENSBTAP00000073737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MPC1	-
ENSBTAT00000126858.1	TFAP2A-202	3047	480aa	ENSBTAP00000097623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKZ6	-
ENSBTAT00000085695.2	TFAP2A-207	2930	441aa	ENSBTAP00000073901.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MHX2	-
ENSBTAT00000074087.2	TFAP2A-203	2901	459aa	ENSBTAP00000063944.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6K4	-
ENSBTAT00000001651.8	TFAP2A-201	2805	433aa	ENSBTAP00000001651.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YI16	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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