Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SSRP1 ENSBTAG00000000375

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Description

structure specific recognition protein 1 [Source:VGNC Symbol;Acc:VGNC:35323]

Location

Primary_assembly 15: 80,527,404-80,537,443 reverse strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 2 transcripts (splice variants), 228 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073946.2	SSRP1-201	2679	712aa	ENSBTAP00000071103.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000000486.7	SSRP1-202	2670	709aa	ENSBTAP00000000486.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQT5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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