Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP40 ENSBTAG00000000149

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Description

ubiquitin specific peptidase 40 [Source:VGNC Symbol;Acc:VGNC:52845]

Location

Primary_assembly 3: 113,167,926-113,257,513 reverse strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 3 transcripts (splice variants), 191 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073478.2	USP40-201	4513	1286aa	ENSBTAP00000057553.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLS6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000000172.7	USP40-203	4876	1233aa	ENSBTAP00000000172.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BKD2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000073057.2	USP40-202	4389	1262aa	ENSBTAP00000068489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MCE2	-

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Summary

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