Transcript: E02H9.8a.1 nhr-121-202

Description

Nuclear hormone receptor family member nhr-121 [Source:NCBI gene (formerly Entrezgene);Acc:184003]

Location

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
E02H9.8b.1	nhr-121-201	1610	463aa	E02H9.8b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WJ04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
E02H9.8a.1	nhr-121-202	1441	461aa	E02H9.8a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TZ99	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,441 bps, Translation length: 461 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9TZ99

Version

E02H9.8a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase