Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM7.2 ENSGALG00010002628

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Description

tripartite motif containing 7.1, MHCB region [Source:NCBI gene (formerly Entrezgene);Acc:425772]

Gene Synonyms

TRIM27

Location

Primary_assembly 16: 2,076,366-2,081,518 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028497.1

About this gene

This gene has 2 transcripts (splice variants), 116 orthologues and 47 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010006100.1	TRIM7.2-201	2553	498aa	ENSGALP00010003808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0X6T5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010006096.1	TRIM7.2-202	2310	494aa	ENSGALP00010003804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XDW4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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