Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Gene: tars-1 WBGene00006617

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Description

Threonine--tRNA ligase, cytoplasmic;threonine--tRNA ligase [Source:NCBI gene (formerly Entrezgene);Acc:174790]

Location

Chromosome II: 11,691,325-11,695,657 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 3 transcripts (splice variants), 315 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
C47D12.6a.1	tars-1-202	2429	725aa	C47D12.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P52709	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
C47D12.6b.1	tars-1-201	2279	684aa	C47D12.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86D21	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
C47D12.6b.2	tars-1-203	2159	684aa	C47D12.6b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86D21	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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