Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: smg5 ENSBSLG00000014276

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Description

SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]

Location

Primary_assembly 16: 7,926,143-7,936,790 reverse strand.

fBetSpl5.2:LR132009.2

About this gene

This gene has 5 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBSLT00000033570.1	smg5-204	4345	1114aa	ENSBSLP00000030328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P7KSP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBSLT00000033647.1	smg5-205	4294	1097aa	ENSBSLP00000030400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBSLT00000033743.1	smg5-202	4102	1033aa	ENSBSLP00000030492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBSLT00000033809.1	smg5-203	4093	1030aa	ENSBSLP00000030558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBSLT00000033946.1	smg5-201	3976	991aa	ENSBSLP00000030694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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