Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: smg7 ENSAMXG00000020809

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Description

SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]

Location

Primary_assembly 16: 6,438,812-6,473,582 reverse strand.

Astyanax_mexicanus-2.0:CM008315.1

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAMXT00000032225.1	smg7-201	7780	1177aa	ENSAMXP00000040133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1JD08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAMXT00000049013.1	smg7-202	7630	1127aa	ENSAMXP00000048992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1K2V4	-
ENSAMXT00000021428.2	smg7-203	3480	1159aa	ENSAMXP00000021428.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W5LNL6	-

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Summary

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