Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: casp2 ENSDARG00000062052

.

Description

caspase 2, apoptosis-related cysteine peptidase [Source:NCBI gene (formerly Entrezgene);Acc:373118]

Location

Chromosome 16: 17,548,695-17,578,503 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128388.4	casp2-203	1800	399aa	ENSDARP00000108155.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000122212.4	casp2-202	4503	437aa	ENSDARP00000105801.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A288CG41	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000137215.3	casp2-204	2644	437aa	ENSDARP00000115348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A288CG41	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000186475.1	casp2-205	1308	435aa	ENSDARP00000148777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0PKX3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000089230.6	casp2-201	783	242aa	ENSDARP00000083663.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

.

Summary

.

.