Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCDH1 ENSXMAG00000016502

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Description

protocadherin-1-like [Source:NCBI gene;Acc:102219051]

Location

Primary_assembly 23: 12,770,465-12,958,556 reverse strand.

X_maculatus-5.0-male:CM008960.1

About this gene

This gene has 3 transcripts (splice variants), 193 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXMAT00000016554.2	PCDH1-201	4530	1217aa	ENSXMAP00000016530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4APY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXMAT00000021270.1	PCDH1-202	6485	1024aa	ENSXMAP00000026017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5QES8	-
ENSXMAT00000023164.1	PCDH1-203	6405	1024aa	ENSXMAP00000029418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5QES8	-

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Summary

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