Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: capn1 ENSXMAG00000008475

.

Description

calpain-1 catalytic subunit-like [Source:NCBI gene;Acc:102217715]

Location

Primary_assembly 14: 9,303,938-9,336,993 reverse strand.

X_maculatus-5.0-male:CM008951.1

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXMAT00000008562.2	capn1-202	2708	706aa	ENSXMAP00000008549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4A255	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXMAT00000023202.1	capn1-203	2115	704aa	ENSXMAP00000030659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5QGI8	-
ENSXMAT00000041319.1	capn1-201	2049	682aa	ENSXMAP00000027543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5Q6V0	-

.

Summary

.

.