Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ptbp1 ENSXETG00000021661

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Description

polypyrimidine tract binding protein 1 [Source:Xenbase;Acc:XB-GENE-5818206]

Location

Primary_assembly 1: 100,870,840-100,889,923 reverse strand.

UCB_Xtro_10.0:CM004443.2

About this gene

This gene has 5 transcripts (splice variants), 319 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000091799.2	ptbp1-201	3624	555aa	ENSXETP00000081937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RAD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000046826.5	ptbp1-202	3652	554aa	ENSXETP00000046826.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XGH0	-
ENSXETT00000097748.2	ptbp1-204	3635	548aa	ENSXETP00000092851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S471	-
ENSXETT00000070486.2	ptbp1-203	3559	523aa	ENSXETP00000090801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SE31	-
ENSXETT00000046827.4	ptbp1-205	1628	528aa	ENSXETP00000046827.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6YXS8	-

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Summary

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