Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pcdh9 ENSXETG00000021181

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Description

protocadherin 9 [Source:Xenbase;Acc:XB-GENE-980876]

Location

Primary_assembly 2: 128,055,538-129,105,008 forward strand.

UCB_Xtro_10.0:CM004444.2

About this gene

This gene has 7 transcripts (splice variants), 219 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000119484.1	pcdh9-201	8362	1295aa	ENSXETP00000115230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K4M0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000121741.1	pcdh9-203	8887	1032aa	ENSXETP00000113761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BUJ8	-
ENSXETT00000108948.1	pcdh9-202	8212	1245aa	ENSXETP00000115837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K646	-
ENSXETT00000120387.1	pcdh9-204	4951	1231aa	ENSXETP00000110691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JRR9	-
ENSXETT00000119877.1	pcdh9-205	4787	1062aa	ENSXETP00000112315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JWE7	-
ENSXETT00000045794.6	pcdh9-206	3570	1032aa	ENSXETP00000045794.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BUJ8	-
ENSXETT00000120280.1	pcdh9-207	3461	1015aa	ENSXETP00000113364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JZB1	-

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Summary

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