Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lsm7 ENSXETG00000022166

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Description

LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:Xenbase;Acc:XB-GENE-1008123]

Location

Primary_assembly 1: 92,714,626-92,746,186 reverse strand.

UCB_Xtro_10.0:CM004443.2

About this gene

This gene has 5 transcripts (splice variants), 196 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000119126.1	lsm7-201	1315	345aa	ENSXETP00000111612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JUG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000116598.1	lsm7-203	1074	121aa	ENSXETP00000108375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JK97	-
ENSXETT00000076305.2	lsm7-204	982	115aa	ENSXETP00000077814.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R7B2	-
ENSXETT00000072777.2	lsm7-202	944	103aa	ENSXETP00000093116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S8D9	-
ENSXETT00000047968.5	lsm7-205	689	113aa	ENSXETP00000047968.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DRD0	-

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Summary

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