Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: capn8.5 ENSXETG00000041804

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Description

calpain 8 5 [Source:Xenbase;Acc:XB-GENE-22164422]

Location

Primary_assembly 5: 9,183,364-9,246,736 forward strand.

UCB_Xtro_10.0:CM004447.2

About this gene

This gene has 10 transcripts (splice variants), 23 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000112854.1	capn8.5-201	5941	480aa	ENSXETP00000117973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803KC39	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000106622.1	capn8.5-202	5875	458aa	ENSXETP00000105895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JDC3	-
ENSXETT00000123548.1	capn8.5-203	5858	441aa	ENSXETP00000106861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JG37	-
ENSXETT00000116518.1	capn8.5-204	3705	474aa	ENSXETP00000104751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JA44	-
ENSXETT00000108744.1	capn8.5-209	3590	474aa	ENSXETP00000109343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JN11	-
ENSXETT00000118095.1	capn8.5-208	3569	467aa	ENSXETP00000114544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K2K3	-
ENSXETT00000115256.1	capn8.5-207	3566	466aa	ENSXETP00000117473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JM76	-
ENSXETT00000123371.1	capn8.5-206	3566	466aa	ENSXETP00000109048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSXETT00000120544.1	capn8.5-205	3566	466aa	ENSXETP00000111487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JTZ6	-
ENSXETT00000117959.1	capn8.5-210	3566	466aa	ENSXETP00000111164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JT42	-

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Summary

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