Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cast ENSXETG00000013262

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Description

calpastatin [Source:Xenbase;Acc:XB-GENE-983329]

Location

Primary_assembly 1: 176,715,713-176,794,370 reverse strand.

UCB_Xtro_10.0:CM004443.2

About this gene

This gene has 10 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000100654.2	cast-208	3462	1002aa	ENSXETP00000093069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SE62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000122435.1	cast-202	3773	964aa	ENSXETP00000117734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803KBV3	-
ENSXETT00000084175.2	cast-210	3589	904aa	ENSXETP00000077255.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R5P1	-
ENSXETT00000074768.2	cast-207	3411	985aa	ENSXETP00000086028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RMG1	-
ENSXETT00000075318.2	cast-206	3408	984aa	ENSXETP00000064510.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8PVI5	-
ENSXETT00000081311.2	cast-201	3359	976aa	ENSXETP00000082154.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R9A1	-
ENSXETT00000102827.2	cast-205	3357	967aa	ENSXETP00000077188.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R7U9	-
ENSXETT00000029051.4	cast-204	3351	965aa	ENSXETP00000029051.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Y6W0	-
ENSXETT00000084098.2	cast-203	3348	964aa	ENSXETP00000065339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8Q792	-
ENSXETT00000029053.4	cast-209	3345	963aa	ENSXETP00000029053.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Y6U8	-

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Summary

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