Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: trim39l.1 ENSXETG00000048760

.

Description

tripartite motif containing 39 like 1 [Source:Xenbase;Acc:XB-GENE-22167849]

Location

Primary_assembly 2: 179,221,298-179,254,532 reverse strand.

UCB_Xtro_10.0:CM004444.2

About this gene

This gene has 4 transcripts (splice variants), 93 orthologues and 168 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000112038.1	trim39l.1-203	1783	544aa	ENSXETP00000102492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803J3T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000124613.1	trim39l.1-204	2363	538aa	ENSXETP00000115834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K692	-
ENSXETT00000122694.1	trim39l.1-201	2180	537aa	ENSXETP00000115254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K4K2	-
ENSXETT00000109684.1	trim39l.1-202	2110	536aa	ENSXETP00000103421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803J6D4	-

.

Summary

.

.