Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pdlim3 ENSXETG00000001563

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Description

PDZ and LIM domain 3 [Source:Xenbase;Acc:XB-GENE-942925]

Location

Primary_assembly 1: 44,436,764-44,458,921 forward strand.

UCB_Xtro_10.0:CM004443.2

About this gene

This gene has 5 transcripts (splice variants), 223 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000091744.2	pdlim3-201	2592	361aa	ENSXETP00000077017.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QUD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000003297.5	pdlim3-204	2512	251aa	ENSXETP00000003297.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BM35	-
ENSXETT00000003294.5	pdlim3-203	2444	313aa	ENSXETP00000003294.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BM59	-
ENSXETT00000119717.1	pdlim3-205	2404	324aa	ENSXETP00000113562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JZV2	-
ENSXETT00000085958.2	pdlim3-202	2328	273aa	ENSXETP00000077476.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R8R6	-

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Summary

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