Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL4A1 ENSXETG00000002637

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Description

collagen, type IV, alpha 1 [Source:Xenbase;Acc:XB-GENE-6451485]

Location

Primary_assembly 2: 117,307,478-117,410,073 forward strand.

UCB_Xtro_10.0:CM004444.2

About this gene

This gene has 3 transcripts (splice variants), 190 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000005670.4	COL4A1-203	5242	1680aa	ENSXETP00000005670.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6TEH8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000084866.2	COL4A1-201	5248	1669aa	ENSXETP00000085053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8Q7J4	-
ENSXETT00000082616.2	COL4A1-202	5153	1669aa	ENSXETP00000064506.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8Q7J4	-

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Summary

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