Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRN ENSXETG00000019283

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Description

protein tyrosine phosphatase receptor type N [Source:Xenbase;Acc:XB-GENE-5871635]

Location

Primary_assembly 9: 83,828,655-83,868,954 forward strand.

UCB_Xtro_10.0:CM004451.2

About this gene

This gene has 10 transcripts (splice variants), 256 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000116241.1	PTPRN-208	6281	993aa	ENSXETP00000113854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A9S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000093867.2	PTPRN-203	6252	993aa	ENSXETP00000097585.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A9S9	-
ENSXETT00000106222.1	PTPRN-202	6210	993aa	ENSXETP00000112237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A9S9	-
ENSXETT00000100430.2	PTPRN-201	6168	964aa	ENSXETP00000097773.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SWN1	-
ENSXETT00000071605.2	PTPRN-204	6159	964aa	ENSXETP00000091744.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SWN1	-
ENSXETT00000099289.2	PTPRN-209	6053	993aa	ENSXETP00000067130.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A9S9	-
ENSXETT00000098129.2	PTPRN-205	6019	964aa	ENSXETP00000080155.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SWN1	-
ENSXETT00000101245.2	PTPRN-210	5921	993aa	ENSXETP00000084691.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A9S9	-
ENSXETT00000082245.2	PTPRN-206	5746	993aa	ENSXETP00000095977.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A9S9	-
ENSXETT00000041784.5	PTPRN-207	5658	993aa	ENSXETP00000041784.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7A9S9	-

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Summary

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