Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: prpf39.1 ENSXETG00000003066

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Description

pre-mRNA processing factor 39 [Source:Xenbase;Acc:XB-GENE-994634]

Location

Primary_assembly 8: 92,558,019-92,575,909 reverse strand.

UCB_Xtro_10.0:CM004450.2

About this gene

This gene has 2 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000006658.5	prpf39.1-202	2776	661aa	ENSXETP00000006658.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DLM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000063577.3	prpf39.1-201	2880	395aa	ENSXETP00000059502.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8PVN2	-

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Summary

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