Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM4 ENSXETG00000024933

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Description

LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:Xenbase;Acc:XB-GENE-945533]

Location

Primary_assembly 1: 103,366,200-103,529,360 forward strand.

UCB_Xtro_10.0:CM004443.2

About this gene

This gene has 7 transcripts (splice variants), 195 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000053581.4	LSM4-201	1628	308aa	ENSXETP00000053581.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7AYB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000110564.1	LSM4-205	1767	144aa	ENSXETP00000102496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803J3V0	-
ENSXETT00000114334.1	LSM4-206	1694	138aa	ENSXETP00000118113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P334	-
ENSXETT00000115076.1	LSM4-203	1686	205aa	ENSXETP00000115738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K5Z8	-
ENSXETT00000062780.3	LSM4-207	1667	129aa	ENSXETP00000064131.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8PWQ3	-
ENSXETT00000106380.1	LSM4-202	1589	295aa	ENSXETP00000117850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803KBR7	-
ENSXETT00000107186.1	LSM4-204	830	253aa	ENSXETP00000117322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803KA99	-

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Summary

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